Step 4. Running simulation

Now, we have the input coordinate and it is time to prepare an input script for LAMMPS. We provide sample input scripts . Explanation of the input script is the same as Step 3 of tutorial for lipid membrane systems and is skipped in this tutorial.

Example input scripts:

• Equilibration in NVT: Download
• NPT: Download
• To run the attached input scripts, invoke following commands:
  lmp -in in.eq -log out.eq.log
  lmp -in in.npt -log out.npt.log

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